These additional datasets are in /wynton/home/database:
Wynton Bioinformatics Open Data Resource
Bioinformatics Data Repository on Wynton
The Pollard lab established a shared data repository stored on Wynton for the UCSF Bioinformatics community. The repository includes publicly available bioinformatics datasets from individual manuscripts, consortia, and databases. These files are readable by anyone with a Wynton account and can be computed on locally from Wynton HPC cluster nodes.
The repository is organized into two directories found at:
- /wynton/group/datasets (data released with a specific publication)
- /wynton/group/databases (all other data, including consortium publications)
The current collection of commonly used resources is based on input gathered from Bioinformatics faculty, students and postdocs. There is sufficient storage to add other datasets, as long as these are used across multiple labs and are freely available for download to enable automated maintenance.
Questions and requests can be directed to Katie Pollard.
This table lists the datasets in /wynton/group/databases: